Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015890438.1_cds_XP_016445143.1_40129
CDS Infomation

[gene=LOC107770355] [db_xref=GeneID:107770355] [protein=26S proteasome non-ATPase regulatory subunit 4 homolog] [protein_id=XP_016445143.1] [location=join(74248..74259,74357..74470,74610..74715,75860..75974,76056..76265,76587..76887,77374..77497,78129..78232,78351..78419,79193..79240)] [gbkey=CDS]
Sequence

ATGGTGCTCGAGGCGACAATGATCTGCATCGACAATTCGGAGTGGATGCGAAACGGTGAT
TACTCGCCCAATAGATTTCAAGCTCTAGCTGATGCAGTTAATCTCATCTGTGGAGCCAAA
ACCCAGTCTAATCCTGAGAATACAGTTGGAATTTTGACTATGGCCGGTAAAGGAGTTCGA
GTGTTAGTCACTCCCACCAGCGATCTTGGAAAAATCTTAGCTTGCATGCACGGATTAGAG
ATAGGTGGTGAGATGAATTTGGCTGCTGGTATCCAGGTAGCCCAGTTAGCTTTGAAGCAT
CGGCAAAACAAAAAGCAACAACAAAGGATCATTGTTTTTGCTGGCAGCCCTGTGAAATAC
GACAAGAAGGTCTTGGAGATGATTGGGAGAAAGTTAAAGAAGAATAGTGTAGCTCTTGAT
GTCGTTAATTTTGGTGAAAATGATGATGGGAAAGCTGAGAAGCTAGAGGCGCTAGTTGCT
GCGGTTAATAACAACGAGAGCAGTCACATCATTCATGTTCCTGCTGGTCCTAATGCTCTC
TCTGGTGTGCTTATAAGTACTCCTATTTTCACTGGTGATGGTGAGGGTGGAAGTGGATTT
GCAGCAGCAGCTGCAGCGGCTGCCGCTGGTGGAGTGTCTGGGTTTGACTTTGGTGTAGAT
CCTAATTTGGATCCTGAACTTGCTCTAGCACTCCGAGTTTCAATGGAGGAGGAAAGGGCG
AGGCAAGAAGCAGCTGCAAAGAAGGCTGCAGACGAAACTGCTACACAAGAGAAAGGAGAA
ACTTCCCAGGATGTTACTATGGCTGAAAATGTCAATGCTGGAACTCCTGAACCCGAAAAC
AAGGCAACTGATCTGATGGAAGATGAGAATGCCTTGTTACAGCAAGCCCTTGCAATGTCG
ATGGATGATGCTTCCTCTAATGTTGCTACACGAGACACTGATATGTCGGAAGCGGCTTCT
GAAGATCAAGACTTGGCACTTGCTCTTCAATTGTCTGTGCAGGACAGCACAAATGATCAG
TCAAGTCAGACAGATATGAGTAAGCTGTTGGCAGATCAATCTTTTGTGTCATCAATCCTT
GCCTCACTTCCAGGCGTTGATCCAAATGATCCCTCAGTTAAAGATTTGCTTGCTTCCATG
CAAGGCCAGTTGGAGAAGAAGGACGAGGACACGGACAAGGAACAGAAAGAAGAGAAGAAG
TAA

Peptide Sequence

PEP ID

XP_016445143.1
PEP Infomation

PREDICTED: 26S proteasome non-ATPase regulatory subunit 4 homolog [Nicotiana tabacum]
Sequence

MVLEATMICIDNSEWMRNGDYSPNRFQALADAVNLICGAKTQSNPENTVGILTMAGKGVR
VLVTPTSDLGKILACMHGLEIGGEMNLAAGIQVAQLALKHRQNKKQQQRIIVFAGSPVKY
DKKVLEMIGRKLKKNSVALDVVNFGENDDGKAEKLEALVAAVNNNESSHIIHVPAGPNAL
SGVLISTPIFTGDGEGGSGFAAAAAAAAAGGVSGFDFGVDPNLDPELALALRVSMEEERA
RQEAAAKKAADETATQEKGETSQDVTMAENVNAGTPEPENKATDLMEDENALLQQALAMS
MDDASSNVATRDTDMSEAASEDQDLALALQLSVQDSTNDQSSQTDMSKLLADQSFVSSIL
ASLPGVDPNDPSVKDLLASMQGQLEKKDEDTDKEQKEEKK

Transcript Sequence

Gene sequence data has not been registered.